2023 Curr. Biol. An environmentally induced multicellular life cycle of a unicellular cyanobacterium Tang, S.*, Pichugin, Y.*, and Hammerschmidt, K. Current Biology 2023 HTML PDF Supp 2022 Nat Genet The evolutionary dynamics of extrachromosomal DNA in human cancers Lange, J.T.*, Rose, J.C., Chen, C.Y.*, Pichugin, Y.*, Xie, L., Tang, J., Hung, K.L., Yost, K.E., Shi, Q., Erb, M.L., Rajkumar, U., Wu, S., Taschner-Mandl, S., Bernkopf, M., Swanton, C., Liu, Z., Huang, W., Chang, H.Y., Bafna, V., Henssen, A.G., Werner, B., and Mischel, P.S. Nature Genetics 2022 HTML PDF Supp eLife Eco-evolutionary dynamics of clonal multicellular life cycles Ress, V., Traulsen, A., and Pichugin, Y.# eLife 2022 HTML PDF PNAS The possible modes of microbial reproduction are fundamentally restricted by distribution of mass between parent and offspring Pichugin, Y., and Traulsen, A. Proceedings of the National Academy of Sciences 2022 HTML PDF Supp J R Soc Interface Evolution of reproductive strategies in incipient multicellularity Gao, Y., Pichugin, Y., Gokhale, C. S., and Traulsen, A. Journal of the Royal Society Interface 2022 HTML PDF Supp 2021 eLife Evolution of irreversible somatic differentiation Gao, Y., Park, H.J., Traulsen, A., and Pichugin, Y.# eLife 2021 HTML PDF Dev Dyn Limb reduction in squamate reptiles correlates with the reduction of the chondrocranium: a case study on serpentiform anguids Yaryhin, O., Klembara, J., Pichugin, Y., Kaucka, M., and Werneburg, I. Developmental Dynamics 2021 HTML PDF Supp 2020 eLife Why is cyclic dominance so rare? Park, H.-J., Pichugin, Y., and Traulsen, A. eLife 2020 HTML PDF PLOS CB Evolution of multicellular life cycles under costly fragmentation Pichugin, Y.#, and Traulsen, A. PLOS Computational Biology 2020 HTML PDF Supp Code Ecol Lett Meta-population structure and the evolutionary transition to multicellularity Rose, C.J., Hammerschmidt, K., Pichugin, Y., and Rainey, P.B. Ecology Letters 2020 HTML PDF Supp 2019 PLOS CB Interacting cells driving the evolution of multicellular life cycles Gao, Y., Traulsen, A., and Pichugin, Y.# PLoS Computational Biology 2019 HTML PDF Supp bioRxiv Stochastic dynamics of extra-chromosomal DNA Pichugin, Y., Huang, W., and Werner, B. bioRxiv 2019 HTML PDF J R Soc Interface Evolution of simple multicellular life cycles in dynamic environments Pichugin, Y.#, Park, H.J., and Traulsen, A. Journal of the Royal Society Interface 2019 HTML PDF Supp Phys Rev E Population size changes and extinction risk of populations driven by mutant interactors Park, H.-J., Pichugin, Y., Huang, W., and Traulsen, A. Phys. Rev. E 2019 HTML PDF 2017 PLOS CB Fragmentation modes and the evolution of life cycles Pichugin, Y.#, Peña, J., Rainey, P.B., and Traulsen, A. PLoS Computational Biology 2017 HTML PDF Supp 2015 J Theor Biol Modes of migration and multilevel selection in evolutionary multiplayer games Pichugin, Y.#, Gokhale, C. S., Garcia, J., Traulsen, A., and Rainey, P. B. Journal of Theoretical Biology 2015 HTML PDF 2012 Peculiarities of cytometrical methods of DNA content determination in the nucleus Pichugin, Y., Semiyanov, K.A., Chernyshev, A.V., Palchikova, I.G., Omelyanchyuk, L.V., and Maltsev, V.P. Cell and Tissue Biology 2012 HTML PDF